All functions |
|
---|---|
Collapse counts based on multiple categorical metadata columns |
|
Compute unique hash for each row of data.frame |
|
Small gene expression matrix |
|
nnzeroGroups |
|
SingleCellExperiment object with fake data |
|
Seurat V3 object with fake data |
|
presto |
|
Pseudobulk DESeq2 |
|
Pseudobulk one versus all |
|
Pseudobulk pairwise |
|
Pseudobulk within |
|
rank_matrix |
|
sumGroups |
|
Summarize differential gene expression pairs |
|
Get top n markers from wilcoxauc |
|
Get top n markers from pseudobulk DESeq2 |
|
Fast Wilcoxon rank sum test and auROC |
|
Group labels for observations in gene expression matrix |